Release notes ============= v0.4 ---- - API: N-dimensional readers now smartly use ``get_frame`` methods; depending on the ``bundle_axes`` settings, the reader optimizes which ``get_frame`` methods is optimal to use. Readers that derive from ``FramesSequenceND`` will need to call ``FramesSequenceND.__init__()`` on initialization, and also will need to register ``get_frame`` methods using ``_register_get_frame(method, axes)``. (PR 227) - API: Swap elements of ``frame_shape`` in ``SpeStack`` to match frames' ``shape``. (PR 241) - API: Swap elements of ``frame_shape`` in ``PyAVVideoReader`` to match frames' ``shape``. (PR 251) - API: Reimplement the ``PyAVVideoReader`` (or: ``Video``) into a reader that uses the frame timestamps and reader frame rate to compute the frame index. The new reader is named ``PyAVReaderTimed`` and the names ``PyAVVideoReader`` and ``Video`` refer to it. For the case when the video misses timestamps, the old implementation is available under ``PyAVReaderIndexed``. - API: The video exporter (``export``) takes more arguments. The argument ``'format'`` has been renamed to ``'pixel_format'``, while ``'format'`` now refers to the container format. (PR 257) - Fixed filename sorting when list is provided explicitely to ``ImageSequence`` (PR 252) - Fixed ``plot_to_frame`` with ``savefig.bbox == 'tight'`` (PR 248) - Added a reader that wraps ImageIO ``ImageIOReader`` (PR 233) - Added a reader that wraps MoviePy ``MoviePyReader`` (PR 233) - Added a reader for single images ``ImageReader`` and ``ImageReaderND`` (PR 249) - Added a reader that stacks readers into a multidimensional reader ``ReaderSequence`` (PR 249) - Added a video exporter based on MoviePy (PR 233) - Added ``BioformatsReader.metadata.fields`` that lists all metadata fields. (PR 230) v0.3.3 ------ - Fix compatibility with Pillow v0.3.0 (PR 204) - API: ``plot_to_frame`` and ``plots_to_frame`` now take ``fig_size_inches`` and ``bbox_inches`` as keyword arguments instead of passing on all keyword arguments to ``imsave`` (PR 206) - Fix zipfile handling in Py3 (PR 199) - Fix CINE reader for Py2 (PR 219) - Support non-monochrome and packed-bits images in NorpixSeq (PR 218) - Update documentation - Update slicerator dependency to v0.9.7 (fixes pipeline nesting) - Update bioformats version to v5.1.7 (PR 224) v0.3.2 ------ - Bug fixes - Build fixes and fewer required deps v0.3.1 ------ - Fix build-related mistakes in v0.3.0. v0.3.0 ------ * Refactor the slicing logic into a separate package, slicerator. * Extend the slicing logic to allow nested lazy slicing. * Add pipeline feature; deprecate process_func. * Support multispectral and multidimensional images. * Add Norpix reader. v0.2.2 ------ This is a simple maintenance release, introducing no functionality changes. The packaging and installation are simplified by adopting tifffile as a dependency rather than directly including the source PIMS. Henceforth, to install PIMS on any platform, we recommend ``conda install -c soft-matter pims``, but ``pip install pims`` is also supported. v0.2.1 ------ * Use PyAV for handling video files * Ships with Christoph Gohlke's tifffile * Added support for .cine files * Added prototype of universal open function which tries to guess the correct class to use to handle a given file based on the extension * Added ability to create an ImageSequence from a list of paths