trackpy.linking.utils

Functions

coords_from_df(df, pos_columns, t_column)

A generator that returns ndarrays of coords from a DataFrame.

coords_from_df_iter(df_iter, pos_columns, ...)

A generator that returns ndarrays of coords from a generator of DataFrames.

points_from_arr(coords, frame_no[, extra_data])

Convert an ndarray of coordinates to a list of PointFindLink

points_to_arr(level)

Convert a list of Points to an ndarray of coordinates

verify_integrity(df)

Verifies that particle labels are unique for each frame, and that every particle is labeled.

Classes

Point(t, pos[, id, extra_data])

Base class for point (features) used in tracking.

TrackUnstored([point])

Base class for objects to represent linked tracks.

Exceptions

SubnetOversizeException

An Exception to be raised when the sub-nets are too big to be efficiently linked.

UnknownLinkingError