Trackpy: Fast, Flexible Particle-Tracking ToolkitΒΆ
Trackpy is a Python package for particle tracking in 2D, 3D, and higher dimensions.
For a brief introduction to the ideas behind the package, you can read the introductory notes. Read the walkthrough to study an example project from start to finish.
Much more detail can be found in the trackpy tutorial. You can also browse the API reference to see available tools for tracking, motion analysis, plotting, and more.
See the installation instructions to obtain the current stable release or the version in development.
To check out the code, report a bug, or contribute a new feature, please visit the github repository.
Documentation
Tutorial
- Walkthrough
- Prediction: Beyond Simple Random Walks
- Feature finding in 3D confocal images
- Subpixel Accuracy and Uncertainty Estimation
- Advanced Linking: Subnetworks and search_range
- Adaptive Search: Changing search_range on the Fly
- Streaming: Processing Unlimited Frames On-Disk
- Making trackpy fast(er)
- Obtaining Diagnostic Information from Linking
- Parallelized Feature Location using IPython Parallel
- Custom Feature Detection: Bubble tracking in 2D foams