trackpy.linking.subnetlinker

Functions to evaluate all possible links between two groups of features.

These are low-level functions that rigorously resolve cases when features can be linked in more than one way.

Functions

drop_link(source_list, dest_size, search_range)

Handle subnets by dropping particles.

nonrecursive_link(source_list, dest_size, ...)

numba_link(s_sn, dest_size, search_range[, ...])

Recursively find the optimal bonds for a group of particles between 2 frames.

recursive_linker_obj(s_sn, dest_size, ...[, ...])

subnet_linker_drop(source_set, dest_set, ...)

Handle subnets by dropping particles.

subnet_linker_nonrecursive(source_set, ...)

subnet_linker_numba(source_set, dest_set, ...)

Link a subnet using a numba-accelerated algorithm.

subnet_linker_recursive(source_set, ...)

Classes

SubnetLinker(s_sn, dest_size, search_range)

A helper class for implementing the Crocker-Grier tracking algorithm.